Ali Khadem

Journal Paper

1. "Deep learning for diagnosing autism spectrum disorder using EEG with upright and inverted face processing tasks"
   Fatemeh Alizadehziri, Ali Khadem
   Biomedical Signal Processing and Control, Vol. 118, 2026
2. "Action Potential Restoration by Deep Learning on Sparsifying Transforms for Compressive Neural Recording in Brain Implants"
   Erfan Ebrahim Esfahani, Ali Khadem
   IEEE Access, Vol. 13, pp.206721-206733, 2025
3. "Assessment of resting state structural-functional relationships in perisylvian region during the early weeks after birth"
   Roxana Namiranian, Hamied Abrieshami Moghaddam, Ali Khadem, Reza Jafari, Amirhossein Chalehchaleh
   Brain Structure and Function, Vol. 230, 2025
4. "Comparing Functional and Effective Connectivity Features in Diagnosis of Autism Spectrum Disorder Using Stacked Autoencoder by Resting-State fMRI Data"
   Pegah Navaei, Ali Khadem, Effat Jalaeian Zaferani
   Frontiers in Biomedical Technologies, Vol. 12, pp.830-843, 2025
5. "Arithmetic-Free Personalized Compressed Sensing Based On Deep Neural Networks for Wireless Transmission From Brain-Computer Interfaces"
   Erfan Ebrahim Esfahani, Ali Khadem
   IEEE Transactions on Systems Man Cybernetics-Systems, Vol. 55, pp.7228-7237, 2025
6. "Classifying cognitive impairment based on FDG-PET and combined T1-MRI and rs-fMRI: An ADNI study"
   Iman Jahani, Ali Jahani, Mehdi Delrobaei, Ali Khadem, Bradley J MacIntosh
   JOURNAL OF ALZHEIMERS DISEASE, Vol. 25, 2024
7. "A novel stretching factor estimator based on an adaptive bisection method for ultrasound strain imaging"
   Zahra Hosseini, Ali Khadem, Mohammadreza Hassannejad Bibalan
   Biomedical Signal Processing and Control, Vol. 92, 2024
8. "Automated detection and forecasting of COVID-19 using deep learning techniques: A review"
   Afshin Shoeibi, Marjane Khodatars, Mahboobeh Jafari, Navid Ghassemi, Delaram Sadeghi, Parisa Moridian, Ali Khadem, Roohallah Alizadehsani, Sadiq Hussain, Assef Zare, Zahra Alizadeh Sani, Fahime Khozeimeh, Saeid Nahavandi, U. Rajendra Acharya, Juan M. Gorriz
   NEUROCOMPUTING, Vol. 577, 2024
9. "A hybrid boundary element-finite element approach for solving the EEG forward problem in brain modeling"
   Nasireh Dayarian, Ali Khadem
   Frontiers in Systems Neuroscience, Vol. 18, pp.1-19, 2024
10. "Twinned neuroimaging analysis contributes to improving the classification of young people with autism spectrum disorder"
    Ali Jahani, Iman Jahani, Ali Khadem, B. Blair Braden, Mehdi Delrobaei, Bradley J. MacIntosh
    Scientific Reports, Vol. 14, 2024
11. "Evaluating the Performance of the Hybrid Boundary Element- Finite Element (BE-FE) Method to Solve Electroencephalography (EEG) Forward Problem Based on the Mesh Quality: A Simulation Study"
    Nasireh Dayarian, Ali Khadem
    Frontiers in Biomedical Technologies, Vol. 10, pp.150-160, 2023
12. "Functional connectivity during morphosyntactic processing: An fMRI study in balanced Turkish-Persian bilinguals"
    Simin Meykadeh, Ali Khadem, Simone Sulpizio, Werner Sommer
    JOURNAL OF NEUROLINGUISTICS, Vol. 68, pp.1-12, 2023
13. "A deep learning method for classification of steady-state visual evoked potentials in a brain-computer interface speller"
    Farzad Saffari, Ali Khadem
    Brain-Computer Interfaces, pp.1-16, 2023
14. "Automatic diagnosis of sleep apnea from biomedical signals using artificial intelligence techniques: Methods, challenges, and future works"
    Parisa Moridian, Afshin Shoeibi, Marjane Khodatars, Mahboobeh Jafari, Ram Bilas Pachori, Ali Khadem, Roohallah Alizadehsani, Sai Ho Ling
    Wiley Interdisciplinary Reviews-Data Mining and Knowledge Discovery, Vol. 12, pp.1-43, 2022
15. "Evaluating the Effect of Increasing Working Memory Load on EEG-Based Functional Brain Networks"
    Susan Samiei, Mehdi Delrobaei, Ali Khadem
    Frontiers in Biomedical Technologies, Vol. 9, pp.160-169, 2022
16. "Detecting ADHD Based on Brain Functional Connectivity Using Resting-State MEG Signals"
    Nastaran Hamedi Sheihani, Ali Khadem, Mehdi Delrobaei, Abbas Babajani-Feremi
    Frontiers in Biomedical Technologies, Vol. 9, pp.110-118, 2022
17. "Normal development of the brain: a survey of joint structural-functional brain studies"
    Roxana Namiranian, Sahar Rahimi Malakshan, Hamied Abrieshami Moghaddam, Ali Khadem, Reza Jafari
    REVIEWS IN THE NEUROSCIENCES, pp.1-21, 2022
18. "An overview of artificial intelligence techniques for diagnosis of Schizophrenia based on magnetic resonance imaging modalities: Methods, challenges, and future works"
    Delaram Sadeghi, Afshin Shoeibi, navid Ghassemi, Parisa Moridian, Ali Khadem, Roohallah Alizadehsani, Mohammad Teshnehlab, Juan M. Gorriz, Fahime Khozeimeh, Yu-Dong Zhang, Saeid Nahavandi, U Rajendra Acharya
    COMPUTERS IN BIOLOGY AND MEDICINE, Vol. 146, pp.1-34, 2022
19. "A sex-dependent computer-aided diagnosis system for autism spectrum disorder using connectivity of resting-state fMRI"
    Hossein Haghighat, Mitra Mirzarezaee, Babak Nadjar Araabi, Ali Khadem
    Journal of Neural Engineering, Vol. 19, pp.2-21, 2022
20. "Automatic diagnosis of schizophrenia and attention deficit hyperactivity disorder in rs-fMRI modality using convolutional autoencoder model and interval type-2 fuzzy regression"
    Afshin Shoeibi, Navid Ghassemi, Marjane Khodatars, Parisa Moridian, Abbas Khosravi, Assef Zare, Juan M. Gorriz, Amirhossein Chalehchaleh, Ali Khadem, U. Rajendra Acharya
    Cognitive Neurodynamics, pp.1-23, 2022
21. ""
    اسما نامداري, ارسلان گلفام, علي مطيع نصرآبادي, Ali Khadem
    Vol. 9, pp.261-288, 2022
22. "Automatic Diagnosis of Schizophrenia in EEG Signals Using CNN-LSTM Models"
    Afshin Shoeibi, Delaram Sadeghi, Parisa Moridian, Navid Ghassemi, Jonathan Heras, Roohallah Alizadehsani, Ali Khadem, Yinan Kong, Saeid Nahavandi, Yu-Dong Zhang, Juan Manuel Gorriz
    Frontiers in Neuroinformatics, Vol. 15, pp.1-16, 2021
23. "Discrimination between Inhibitory and Excitatory Neurons of Mouse Hippocampus Based on the Shape of Extracellular Spike Waveforms"
    Mehrdad Oghazian, Farzad Saffari, Ali Khadem
    Frontiers in Biomedical Technologies, Vol. 8, pp.161-169, 2021
24. "Functional Networks Abnormalities in Autism Spectrum Disorder: Age-Related Hypo and Hyper Connectivity"
    Hossein Haghighat, Mitra Mirzarezaee, Babak Nadjar Araabi, Ali Khadem
    BRAIN TOPOGRAPHY, Vol. 34, pp.306-322, 2021
25. "An age-dependent Connectivity-based computer aided diagnosis system for Autism Spectrum Disorder using Resting-state fMRI"
    Hossein Haghighat, Mitra Mirzarezaee, Babak Nadjar Araabi, Ali Khadem
    Biomedical Signal Processing and Control, Vol. 71, pp.1-17, 2021
26. "Deep learning for neuroimaging-based diagnosis and rehabilitation of Autism Spectrum Disorder: A review"
    Marjane Khodatars, Afshin Shoeibi, Delaram Sadeghi, Navid Ghaasemi, Mahboobeh Jafari, Parisa Moridian, Ali Khadem, Roohallah Alizadehsani, Assef Zare, Yinan Kong, Abbas Khosravi, Saeid Nahavandi, Sadiq Hussain, U. Rajendra Acharya, Michael Berk
    COMPUTERS IN BIOLOGY AND MEDICINE, Vol. 139, pp.1-25, 2021
27. "Single-Channel Selection for Detecting Steady-State Visual Evoked Potentials in a Brain-Computer Interface Speller"
    Farzad Saffari, Ali Khadem
    Frontiers in Biomedical Technologies, Vol. 8, pp.155-160, 2021
28. "Functional Connectivity Based Diagnosis of Bipolar Disorder by using Resting State fMRI"
    Amirhossein Chalehchaleh, Ali Khadem
    Vol. 14, pp.31-42, 2020
29. "Improved dynamic connection detection power in estimated dynamic functional connectivity considering multivariate dependencies between brain regions"
    Somayeh Maleki Balajoo, Davood Asemani, Ali Khadem, Hamid Soltanian-Zadeh
    HUMAN BRAIN MAPPING, Vol. 41, pp.4264-4287, 2020
30. "Automatic Sleep Stage Classification Using 1D Convolutional Neural Network"
    Asma Salamatian, Ali Khadem
    Frontiers in Biomedical Technologies, Vol. 7, pp.142-150, 2020
31. "Assessment of Functional Disorders of Magno, Parvo and Konio-Cellular Pathways in MS Patients by using fMRI"
    Neda Sardaripour, Alireza Sedghi, Hamied Abrieshami Moghaddam, Ali Khadem, Ali Yoonessi
    Vol. 12, pp.311-320, 2018
32. "A New Hybrid Method for Segmentation and Detection of the Tumors in the Mammographic Images of the Breast Tissue"
    Hamed Jabbari , Nooshin Bigdeli, Ali Khadem
    Iranian Journal of Breast Diseases, Vol. 9, pp.14-24, 2016
33. "Long-Range Reduced Predictive Information Transfers of Autistic Youths in EEG Sensor-Space During Face Processing"
    Ali Khadem, Gholam-Ali Hossein-Zadeh, Anahita Khorrami
    BRAIN TOPOGRAPHY, Vol. 29, pp.283-295, 2016
34. "Quantification of the effects of volume conduction on the EEG/MEG connectivity estimates: an index of sensitivity to brain interactions"
    Ali Khadem, Gholam-Ali Hossein-Zadeh
    PHYSIOLOGICAL MEASUREMENT, Vol. 35, pp.2149-2164, 2014
35. "Estimation of direct nonlinear effective connectivity using information theory and multilayer perceptron"
    Ali Khadem, Gholam-Ali Hossein-Zadeh
    JOURNAL OF NEUROSCIENCE METHODS, Vol. 229, pp.53-67, 2014

Conference Paper

1. "32nd National and 10th International Iranian Conference on Biomedical Engineering (ICBME)"
   Mahdi Mollaei, Amirhossein Mashghdoust, Ali Khadem
   Classification of Excitatory and Inhibitory Neurons in Animal Data Using Machine Learning and CNN Models, 2025
2. "6th international Brain Stimulation Conference"
   Yousefi Farahnaz, Dadashi Mohsen, Ali Khadem, Heidari Omid Reza, Nitsche Michael, Salehinejad Mohammad Ali
   EFFICACY OF LEFT PREFRONTAL-TEMPOROPARIETAL TDCS ON SYMPTOM REDUCTION AND COGNITIVE IMPROVEMENT IN SCHIZOPHRENIA: A RANDOMIZED, SHAM, CONTROLLED, PARALLEL GROUP STUDY, 2025
3. "The 6th International Conference on Pattern Recognition and Image Analysis (IPRIA 2023)"
   Sepideh Ghafouri vaighan, Ali Khadem
   ارزيابي معيارهاي گراف شبكه ارتباطات كاركردي مغز در مبتلايان به اختلال دوقطبي با استفاده از تصويربرداري تشديد مغناطيسي عملكردي, 2023
4. "29th National and 7th International Iranian Conference on Biomedical Engineering"
   Ali Najd, Soheil Akhoondi, Yaghoob Khezri, Ali Khadem
   Blood Pressure Measurement Using a Gaussian Curve Fitting Algorithm, 2022
5. "9th International Work-Conference on the Interplay Between Natural and Artificial Computation, IWINAC 2022"
   Behnam Gholami, Mohammad Hossein Behboudi, Ali Khadem, Afshin Shoeibi, Juan Manuel Gorriz
   Sleep Apnea Diagnosis Using Complexity Features of EEG Signals, 2022
6. "30th International Conference on Electrical Engineering (ICEE2022)"
   Zahra Hosseini, Ali Khadem, Mohammadreza Hassannejad Bibalan
   Displacement Estimation for Ultrasound Elastography Based on a Robust Uniform Stretching Method, 2022
7. "11th Annual Meeting of the Iranian Research Association for Vision and Ophthalmology (IRAVO)"
   Ali Khadem
   Assessment of Functional Disorders of Magnocellular, Parvocellular, and Koniocellular Visual Pathways in MS Patients Using fMRI, 2022
8. "7 th International conference on signal processing and intelligent systems"
   Masood Hamed Saghayan, Saman Seifpour, Ali Khadem
   Automated Sleep Stage Scoring Using Brain Effective Connectivity and EEG Signals, 2021
9. "7 th International conference on signal processing and intelligent systems"
   Behnam Gholami, Mohammad Hossein Behboudi, Mohammad Ghasem Mahjani, Ali Khadem
   Diagnosis of Sleep Apnea Syndrome from EEG Signals using Different Entropy measures, 2021
10. "10th Basic and Clinical Neuroscience Congress (BCNC 2021)"
    Nasireh Dayarian, Reza Jafari, Ali Khadem
    Comparing the accuracy of EEG forward solution of finite element and boundary element methods considering different dipole locations, 2021
11. "11th International Conference on Computer and Knowledge Engineering(ICCKE )"
    Nastaran Hamedi Sheihani, Ali Khadem, Sajjad Vardast, Mehdi Delrobaei, Abbas Babajani-Feremi
    An Effective Connectomics Approach for Diagnosing ADHD using Eyes-open Resting-state MEG, 2021
12. "5th Iranian Symposium on Brain Mapping Updates (ISBM2021)"
    Susan Samiei, Mehdi Delrobaei, Ali Khadem
    Evaluating the Effect of Increasing Working Memory Load on EEG-Based Functional Brain Networks, 2021
13. "5th Iranian Symposium on Brain Mapping Updates (ISBM2021)"
    Nastaran Hamedi Sheihani, Ali Khadem, Mehdi Delrobaei
    Detecting ADHD Children Based on Brain Functional Connectivity Using MEG Signals, 2021
14. "5th International Conference on Pattern Recognition and Image Analysis (IPRIA 2021)"
    Amirhossein Chalehchaleh, Ali Khadem
    Diagnosis of Bipolar I Disorder using 1 D-CNN and Resting-State fMRI Data, 2021
15. "5th International Conference on Pattern Recognition and Image Analysis (IPRIA 2021)"
    Zahra Hosseini, Ali Khadem, Mohammadreza Hassannejad Bibalan
    Window-Based Strain Estimation Using Weighted Displacement Obtained From Normalized Cross-Correlation, 2021
16. "27th national and 5th International Iranian Conference on Biomedical Engineering"
    Nastaran Hamedi Sheihani, Susan Samiei, Mehdi Delrobaei, Ali Khadem
    Imagined Speech Decoding From EEG: The Winner of 3rd Iranian BCI Competition (iBCIC2020), 2020
17. "8th international conference of cognitive science"
    Farzad Saffari, Ali Khadem
    A Deep Learning Approach for Steady-State Visual Evoked Potential Classification in a Brain-Computer Interface Speller, 2020
18. "28th Iranian Conference on Electrical Engineering (ICEE)"
    Mehrdad Oghazian, Ali Khadem, Esghaei Moein
    Functional classification of neurons in mouse hippocampus based on spike waveforms in extracellular recordings, 2020
19. "4th Iranian Symposium on Brain Mapping Updates (ISBM2020)"
    Asma Salamatian, Ali Khadem
    Automatic sleep stage classification using 1D convolutional neural network, 2020
20. "4th Iranian Symposium on Brain Mapping Updates (ISBM2020)"
    Mehrdad Oghazian, Ali Khadem, Moein Esghaei
    Discrimination between inhibitory and excitatory neurons of mouse hippocampus based on extracellular spike waveforms, 2020
21. "4th Iranian Symposium on Brain Mapping Updates (ISBM2020)"
    Farzad Saffari, Ali Khadem
    Optimum Single-Channel Selection for Detecting Steady State Visual Evoked Potentials in a Brain-Computer Interface Speller, 2020
22. "27th Iranian Conference on Electrical Engineering(ICEE2019)"
    Saba Bayatfar, Saman Seifpour, Mohammadreza Asghari Oskoei, Ali Khadem
    An Automated System for Diagnosis of Sleep Apnea Syndrome Using Single-Channel EEG Signal, 2019
23. "3rd International Conference on Electrical Engineering"
    Feryal Soltani, Neda Faraji, Ali Khadem
    ارايه روش جديدي براي حسگري فشرده ي سيگنال هاي الكتروانسفالوگرافي چندكاناله, 2018
24. "6th basic and cinical neuroscience congress"
    Saman Seifpour, Mohammad Mikaeili, Anahita Khorrami, Mohammad Nami, Khosro Sadeghniiat, Ali Khadem
    REM sleep and emotional processing Insights from functional connectivity analysis of sleep EEG signal, 2017
25. "24th National and 2nd International Iranian Conference on Biomedical Engineering (ICBME 2017)"
    Dejman Ali , Ali Khadem, Khorrami Anahita
    Comparing the Effective Connectivity Graphs Estimated by Granger Causality Index with Transfer Entropy a Case Study on Autism Spectrum Disorders, 2017
26. "The 25th Iranian conference on Electrical Engineering(ICEE2017)"
    Ali Dejman, Ali Khadem, Anahita Khorrami
    Exploring the disorders of brain effective connectivity network in ASD A case study using EEG transfer entropy and graph theory, 2017
27. "23rd Iranian Conference on Biomedical Engineering (ICBME2016)"
    Ali Khadem
    Artifact Suppression in Freehand Ultrasound Elastography Using Multiscale Principal Component Analysis, 2016